Hi guys, I have this assignment to submit in 2 weeks. It’s about BioPython, and my teacher is really bad, he doesn’t know how to explain things and I really need help.
Does someone knows how to do it pleaaase ?
well this is kind of easy
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Hello, thank you very much for your answer.
I read a lot of things about Biopython on the internet but it seems really complicated to understand it only by reading. I found some clues like I know that, to work with gene bank, there is a code formula which is with : ‘Entrez.efetch(db=“nucleotide”, rettype=‘gbwithparts’, retmode=‘text’, id=‘nc_003197’) as handle:
seq_record = SeqIO.read(handle, ‘gb’)’
But if I want to retrieve a sequence in Genbank and I don’t know the ID of the sequence (Because I need to ask the user to enter a sequence to identify), how can I do ?
I wrote that code so far to ask the user for a sequence to identify, and to retrieve this sequence from Genbank but I am kind of blocked now.
Hello, do you know how I can retrieve a sequence from Genbank without using the name of the sequence but using the sequence itself ?
